BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB009A02LP1|AL425955
(820 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1525 1259 0.0
3x_Contig792 109 9e-24
>3x_Contig1525
Length = 8924
Score = 1259 bits (635), Expect = 0.0
Identities = 642/643 (99%), Gaps = 1/643 (0%)
Strand = Plus / Minus
Query: 179 catattgaagaagcttg-gcgtgttttacagactgtgaacatgaaacatagagctttatc 237
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8924 catattgaagaagcttgagcgtgttttacagactgtgaacatgaaacatagagctttatc 8865
Query: 238 gaattataaaggtggtagattgtcgagtagaacagtcatcatgtaataccacacaagata 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8864 gaattataaaggtggtagattgtcgagtagaacagtcatcatgtaataccacacaagata 8805
Query: 298 ggtctttgtatcagtaattgtcttataatatcggaatcctgtaactattaaataactact 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8804 ggtctttgtatcagtaattgtcttataatatcggaatcctgtaactattaaataactact 8745
Query: 358 ctataaactaatgtcacttgtatgcatgaaggaatccctggggtgatcccctgaaaaaag 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8744 ctataaactaatgtcacttgtatgcatgaaggaatccctggggtgatcccctgaaaaaag 8685
Query: 418 ccgccagtatgagcctcttatccaccatttcctgtattatgtcgttggcattgtactcag 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8684 ccgccagtatgagcctcttatccaccatttcctgtattatgtcgttggcattgtactcag 8625
Query: 478 gaccataatgttctctatatctttggaataaggagacgtttttgtttttgatttctgttt 537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8624 gaccataatgttctctatatctttggaataaggagacgtttttgtttttgatttctgttt 8565
Query: 538 cactctcagcaattcgagacatgaacggtaaataccatctggaaatgtcttttaatttgt 597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8564 cactctcagcaattcgagacatgaacggtaaataccatctggaaatgtcttttaatttgt 8505
Query: 598 gtgttgctgaaaattcgagtgccaaattgttaataaaatctagttcaaatgcatcgctgt 657
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8504 gtgttgctgaaaattcgagtgccaaattgttaataaaatctagttcaaatgcatcgctgt 8445
Query: 658 tgtcttctgatttaaggcgatagtcttttaaaacgccagtcttccttctggagctacgag 717
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8444 tgtcttctgatttaaggcgatagtcttttaaaacgccagtcttccttctggagctacgag 8385
Query: 718 tgtttccaagcattgtcagaacatttccttgaggtgagttattgactctagtcttgaggt 777
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8384 tgtttccaagcattgtcagaacatttccttgaggtgagttattgactctagtcttgaggt 8325
Query: 778 attttatcatctcattaacgcaaatactaaccttatcatgggc 820
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8324 attttatcatctcattaacgcaaatactaaccttatcatgggc 8282
>3x_Contig792
Length = 2203
Score = 109 bits (55), Expect = 9e-24
Identities = 58/59 (98%)
Strand = Plus / Minus
Query: 1 aacttttgagatcgtctgtgccataacggaaactgcattgaagatcaaaacaagatacg 59
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 59 aacttttgagatcgtctgtgcaataacggaaactgcattgaagatcaaaacaagatacg 1
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5891
Number of Sequences: 1807
Number of extensions: 5891
Number of successful extensions: 35
Number of sequences better than 1.0e-20: 2
length of query: 820
length of database: 10,358,551
effective HSP length: 16
effective length of query: 804
effective length of database: 10,329,639
effective search space: 8305029756
effective search space used: 8305029756
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)